Getting into the right mindset to read scientific papers quickly:

Before you start anything, you need to isolate your singular goal for reading papers in the first place. Otherwise, you’ll be passively reading every paper that comes up rather than hunting for specific details. Don’t be a forager, consuming anything edible that crosses your path. Be a hunter: have a specific target that keeps you selective, efficient, and guides every step you take.

Most of these tips are designed to help you focus on extracting value efficiently so you won’t give up after two papers! So, what is your goal here? Is it:

  • Getting a solid foundation in your field?
  • Collecting the newest research for a cutting-edge literature review?
  • Finding ideas and inspiration to further your own research?  

I’ll be honest here: The first dozen papers of a new subject will be a grind. But it gets easier, I promise! When you find yourself blasting through the “template” introduction and recognizing citations you’ve already read, you know you’re close to being an expert. At this point, if you’re struggling to understand a new paper in the field, it’s likely the authors’ fault, not yours. 

Keep in mind that academics aren’t exactly known for concise writing. Practice skimming paragraphs for high-value verbs, numerical values and claims. Skip over wordy low-value prose like “We thus appear to have potentially demonstrated a novel and eco-friendly synthesis method for…” It’s easy to fall back to a casual fiction-reading mentality. Try to stay in a high-energy search mode and you’ll be effectively done in half the time.

Later on I’ll reference our journal article notes template , which I used to synthesize notes for my literature review. Go ahead now and open it in Google Drive where you can download and edit it for free. We just ask that you drop your email so that we can stay in touch on new helpful resources and awesome new tools for scientists.

How do you read scientific papers effectively?

Below are my tips for how to read scientific papers most effectively. I used this methodology to write a critical literature review in a brand new field in about 4 months, citing over 150 papers. My first-author paper now has nearly 1000 citations in only six years since publication, making it my advisor’s most highly-cited paper in his 30-year career! You can do this. Just keep reading: 

1. Briefly read the Abstract

The abstract is your most condensed look at the paper. Read it quickly and highlight any claims or phrases that you want more details on. I like to copy the entire abstract text or screenshot into the journal article notes template for later reference. It also helps to copy the keyword text into the template or your citation manager tags so you can search for them later. Things to read for:

  • Is the research applicable to what you need right now?
  • Are the findings significant enough to help you with your goal?
  • What is the most interesting aspect of this paper?

2. Carefully read the Conclusion

Reading the conclusion gives you an instant look at the quality of the paper. Do the authors seem to make claims bigger than appropriate for the scope of the paper? Do they use hyperbole to inflate the importance of the work? Are the results not clearly stated? These could be red flags identifying a poor quality paper. 

Highlight and copy a few of the most important phrases or sentences out of the conclusion into the journal article template in the first bulleted section or into the notes section of your reference manager. Look for:

  • What the authors think they accomplished in this work.
  • The reasoning behind their results. Any useful insights?
  • Ideas for future experiments.  

3. Identify the most important figures and dig through the Results & Discussion for more detail

If you’re still interested after the first two steps, start digging into the results and discussion for more details. Before making the deep dive, write down the specific questions you need to answer in your notes section. Search the paper for those answers, writing down new questions as they come to mind. 

One favorite strategy here is to look at each figure, read the caption and then dig through the text for supporting information (use Ctrl+F for “Fig. 3”, for example). The figures should tell the story as well as (and more quickly than) the text. 

Copy and paste specific claims you may want to quote or paraphrase later. Isolate what the authors think they did from your own commentary and summarize it in your own words.

4. Search the Methods section to answer questions if necessary

The Methods section is usually the most tedious and tiring to read. That’s why we don’t do it first. Only go through it when necessary or you’ll never get to the 100 other papers you just downloaded.

Go back through the Methods when:

  • This paper showed a different result than another similar paper, and the methods may have caused the difference. 
  • You’re sure you want to include the paper and you want to be critical of the way they conducted their experiments. 
  • You may want to replicate their experiment in your own work.

Make sure to note anything unique, odd, or unexpected in their methods. Maybe it will lead to a breakthrough in your own work or help explain a surprise result!

the scientific method funny PhD Comics cartoon

5. Summarize your thoughts and critiques

Re-read your notes so far to check for any missed questions. Go back and extract sentences or paragraphs of the paper that you want to challenge so you can quickly find them verbatim. Write your own thoughts and questions around those topics so you can copy them into your literature review later. Ideas for notes:

  • What would you have done differently in the experiment or data analysis?
  • Is there an obvious gap or follow-up experiment?
  • Does this paper uniquely contribute to the field’s body of knowledge? What is its contribution?

6. Copy important figures into your notes

This is the most important step but many don’t do this. Figures are the anchors of every good journal article and the authors who spend the most time making excellent figures also will get cited the most often in review papers. This leads to even more citations from experimental articles. My secret for getting the most citations of my review paper was to spend more time than typical finding or creating the best possible figures for explaining the content. You can do this too, it just takes time!

The best reference manager Zotero doesn’t have an “add image” button in the “Notes” section but you can actually screenshot the image with the Snipping Tool then Ctrl+v paste it into the notes section! Now when you come back to the paper you’ll get an instant look at the most significant figures. If you know you want to use one of these figures in your review, add a tag to the paper like “Figure Rev. Paper 1”.

7. Pick important references (especially review papers) out of the Introduction and Discussion

Now that you have a good understanding of the paper, it’s time to start tidying things up and thinking of where to go next. Skim the introduction for helpful references or check the first 5-10 listed in the References section to find mostly review papers you can use for new leads. Go and download these into an “Unread review papers” folder in your citation manager for when you get stuck later. 

Then, go to the journal/library website and check for new papers that have cited this paper. This will help you follow the trail of a specific research topic to see how it’s developing. Download the interesting ones and put them in an “unread” folder for this very specific research topic. In Zotero, you can even tag the paper as “related” to the current paper for quick access later.  

Zotero example of making unread review paper folders

8. Clean up the metadata if you plan on citing this paper later

If there’s a chance you’ll cite this paper later, make sure to clean up the metadata so your word processor citation plugin creates a clean reference section. Author initials may be backward, special characters in the title may be corrupted, the year or issue of the journal could be missing or the “type” of citation could be wrong (listed as a book instead of journal article) which would change the format.

zotero metadata fields missing example

Fully tag the paper using whatever system you’ve come up with. Keywords, chemicals, characterization methods or annotation tags like “Best” can all be useful. One other trick I used was to come up with an acronym for the paper I was about to write - “NMOBH” for example - and use that as a tag in any paper that I planned to cite later.

zotero citation manager metadata tagging example

Being methodical in your post-read organization will save you many hours and endless frustration later on. Follow these tips on how to organize your research papers and you’ll be a pro in no time. You’re almost done, but don’t skip this part!

9. Take a break, then repeat!

This methodology makes it a little easier to get through a paper quickly once you get some practice at it. But what about 10 papers? 100?! You can’t do all of your reading in a week. I set a habit for myself over the summer to read two papers a day for 2 months. If I missed a day, I made it up the next day. This keeps you fresh for each paper and less likely to miss important points because you’re falling asleep!

Get comfortable. I preferred to kick back on a couch or outside in a chair using my laptop in tablet mode so I had a long vertical screen and a stylus to highlight or circle things. Reading 2-column scientific articles on a 13 inch 16:9 laptop screen at a desk for hours on end is a special kind of torture that I just couldn’t endure. Change scenery often, try different beverages, take breaks, and move around!

Here are some bonus tips for breaking the monotony between papers:

  • Pick your top few most controversial, confusing, or interesting papers and ask a colleague or advisor for their thoughts. Bring them some coffee to discuss it with you for another perspective. 
  • Email the authors to ask a question or thank them for their contribution. This is a great way to make a connection. Don’t ask for too much on the first email or they may not respond - they are busy!  
  • Reward yourself for every paper read. Maybe a small snack or a short walk around the block. Physically cross this paper off your to-do list so you internalize the good feeling of the accomplishment!

How do you choose which papers to read next?

So you’re downloading 15 new papers for every 1 paper you read? This could get out of control quickly! How do you keep up? Here are some tips for prioritization:

Google Scholar is an excellent tool for tracking citation trees and metrics that show the “importance” of each paper. Library portals or the journal websites can also be good for this.

  • If you’re starting a search on a new topic, begin with a relevant review paper if one exists. Beware of reading too many review papers in a row! You’ll end up with an intimidating pile of citations to track down and it will be difficult to know where to start after a few-day break. 
  • Prioritize experimental papers with high citation numbers, in journals with high impact factors and by authors with a high h-index (30+) published within the last 5 years. These papers will set the bar for every paper you read after. You can check the journal’s rank in your field by using Scimago . 
  • Identify the most prominent authors in this field and find their most recent papers that may not have many citations (yet). This indicates where the field is heading and what the top experts are prioritizing. 
  • After you’ve covered a lot of ground above, start taking more chances on less-established authors who may be taking new approaches or exploring new topics. By now you’ll be well-equipped to identify deficiencies in methods, hyperbolic claims, and arguments that are not well-supported by data. 

Final takeaways for how to read a scientific paper:

  • Don't be a passive word-for-word reader. Be actively hunting and searching for info.
  • Read in this order: Abstract, Conclusion, Figures, Results/Discussion, Methods.
  • The figures are the anchors. Save the best ones to reproduce in your article and spend extra time to create your own summary figures to supercharge your chances of citation.
  • Clean up the metadata and use a good tagging system to save time later. 
  • Set your daily goal, reward yourself for finishing, and take breaks to avoid burnout!

Lastly, remember that this blog is sponsored by BioBox Analytics ! BioBox is a data analytics platform designed for scientists and clinicians working with next-generation-sequencing data. Design and run bioinformatic pipelines on demand, generate publication-ready plots, and discover insights using popular public databases. Get on the waitlist and be the first to access a free account at biobox.io !

BioBox Analytics Logo

What sections of a research paper should you read first?

The Abstract and Conclusion sections of a research paper give you a quick sense if you should continue spending time on the paper. Assess the quality of the research and whether the results are significant to your goals. If so, move to the most important Figures and find additional details in the Results and Discussion when necessary. 

What is the fastest way to read a research article?

Skim the Abstract and highlight anything of interest. Skip to the Conclusions and do the same. Write questions that pop up. Examine each Figure and find the in-line reference text for further details if needed for understanding. Then search the Results and Discussion for answers to your pre-written questions.  

What is the best citation manager software to use for my scientific papers?

I used Mendeley through grad school but recently Zotero seems to be more popular. Both are free and have all the features you need! EndNote is excellent but expensive, and if you lose your institutional license you’ll have a hard time transferring to one of the free offerings. Zotero is your best bet for long-term organizational success!

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Proactive Grad

How to Read Research Papers: A Cheat Sheet for Graduate Students

Aruna Kumarasiri

  • August 4, 2022
  • PRODUCTIVITY

how to read research papers

It is crucial to stay on top of the scientific literature in your field of interest. This will help you shape and guide your experimental plans and keep you informed about what your competitors are working on.

To get the most out of your literature reading time, you need to learn how to read scientific papers efficiently. The problem is that we simply don’t have enough time to read new scientific papers in our results-driven world. 

It takes a great deal of time for researchers to learn how to read research papers. Unfortunately, this skill is rarely taught.

I wasted a lot of time reading unnecessary papers in the past since I didn’t have an appropriate workflow to follow. In particular, I needed a way to determine if a paper would interest me before I read it from start to finish.

So, what’s the solution?

This is where I came across the Three-pass method for reading research papers. 

Here’s what I’ve learned from using the three pass methods and what tweaks I’ve made to my workflow to make it more personalized.

Build time into your schedule 

Before you read anything, you should set aside a set amount of time to read research papers. It will be very hard to read research papers if you do not have a schedule because you will only try to read them for a week or two, and then you will feel frustrated. An organized schedule reduces procrastination significantly.

 For example, I take 30-40 minutes each weekday morning to read a research paper I come across.

After you have determined a time “only” to read research papers, you have to have a proper workflow.

Develop a workflow

For example, I follow a customized version of the popular workflow, the “Three-pass method”. 

When you are beginning, you may follow the method exactly as described, but as you get more experienced, you can make some changes down the road.

Why you shouldn’t read the entire paper at once?

Oftentimes, the papers you think are so important and that you should read every single word are actually worth only 10 minutes of your time.

Unlike reading an article about science in a blog or newspaper, reading research papers is an entirely different experience. In addition to reading the sections in a different order, you must take notes, read them several times, and probably look up other papers for details. 

It may take you a long time to read one paper at first. But that’s okay because you are investing yourself in the process.

However, you’re wasting your time if you don’t have a proper workflow. 

Oftentimes, reading a whole paper might not be necessary to get the specific information you need.

The Three-pass concept

The key idea is to read the paper in up to three passes rather than starting at the beginning and plowing through it. With each pass, you accomplish specific goals and build upon the previous one.

The first pass gives you a general idea of the paper. A second pass will allow you to understand the content of the paper, but not its details. A third pass helps you understand the paper more deeply.

The first pass (Maximum: 10 minutes)

The paper is scanned quickly in the first pass to get an overview. Also, you can decide if any more passes are needed. It should take about five to ten minutes to complete this pass.

Carefully read the title, abstract, and introduction

You should be able to tell from the title what the paper is about. In addition, it is a good idea to look at the authors and their affiliations, which may be valuable for various reasons, such as future reference, employment, guidance, and determining the reliability of the research.

The abstract should provide a high-level overview of the paper. You may ask, What are the main goals of the author(s) and what are the high-level results? There are usually some clues in the abstract about the paper’s purpose. You can think of the abstract as a marketing piece.

As you read the introduction, make sure you only focus on the topic sentences, and you can loosely focus on the other content.

What is a topic sentence?

Topic sentences introduce a paragraph by introducing the one topic that will be the focus of that paragraph. 

The structure of a paragraph should match the organization of a paper. At the paragraph level, the topic sentence gives the paper’s main idea, just as the thesis statement does at the essay level. After that, the rest of the paragraph supports the topic.

In the beginning, I read the whole paragraph, and it took me more than 30 minutes to complete the first pass. By identifying topic sentences, I have revolutionized my reading game, as I am now only reading the summary of the paragraph, saving me a lot of time during the second and third passes.

Read the section and sub-section headings, but ignore everything else 

Regarding methods and discussions, do not attempt to read even topic sentences because you are trying to decide whether this article is useful to you.

Reading the headings and subheadings is the best practice. It allows you to get a feel for the paper without taking up a lot of time.

Read the conclusions

It is standard for good writers to present the foundations of their experiment at the beginning and summarize their findings at the end of their paper.

Therefore, you are well prepared to read and understand the conclusion after reading the abstract and introduction.

Many people overlook the importance of the first pass. In adopting the three-pass method into my workflow, I realized that many papers that I thought had high relevance did not require me to spend more time reading. 

Therefore, after the first pass, I can decide not to read it further, saving me a lot of time.

Glance over the references

You can mentally check off the ones you’ve already read.

As you read through the references, you will better understand what has been studied previously in the field of research.

First pass objectives

At the end of the first pass, you should be able to answer these questions: 

  • What is the  category  of this paper? Is it an analytical paper? Is it only an “introductory” paper? (if this is the case, probably, you might not want to read further, but it depends on the information you are after)or is it an argumentative research paper?
  • Does the  context  of the paper serve the purpose for what you are looking for? If not, this paper might not be worth passing on to the second stage of this method.
  • Does the basic logic of the paper seem to be valid? How do you comment on the  correctness  of the paper?
  • What is the main  output  of the paper, or is there output at all?
  • Is the paper well written? How do you comment on the  clarity  of the paper?

After the first pass, you should have a good idea whether you want to continue reading the research paper.

Maybe the paper doesn’t interest you, you don’t understand the area enough, or the authors make an incorrect assumption. 

In the first pass, you should be able to identify papers that are not related to your area of research but may be useful someday. 

You can store your paper with relevant tags in your reference manager, as discussed in the previous blog post in the  Bulletproof Literature Management System  series.

This is the third post of the four-part blog series:  The Bulletproof Literature Management System . Follow the links below to read the other posts in the series:

  • How to How to find Research Papers
  • How to Manage Research Papers
  • How to Read Research Papers (You are here)
  • How to Organize Research Papers

The second pass (Maximum: 60 minutes)

You are now ready to make a second pass through the paper if you decide it is worth reading more.

You should now begin taking some high-level notes because there will be words and ideas that are unfamiliar to you. 

Most reference managers come with an in-built PDF reader. In this case, taking notes and highlighting notes in the built-in pdf reader is the best practice. This method will prevent you from losing your notes and allow you to revise them easily.

Don’t be discouraged by everything that does not make sense. You can just mark it and move on. It is recommended that you only spend about an hour working on the paper in the second pass. 

In the second pass:

  • Start with the abstract, skim through the introduction, and give the methods section a thorough look. 
  • Make sure you pay close attention to the figures, diagrams, and other illustrations on the paper. By just looking at the captions of the figures and tables in a well-written paper, you can grasp 90 percent of the information. 
  • It is important to pay attention to the overall methodology . There is a lot of detail in the methods section. At this point, you do not need to examine every part. 
  • Read the results and discussion sections to better understand the key findings.
  • Make sure you mark the relevant references in the paper so you can find them later.

Objectives of the second pass

You should be able to understand the paper’s content. Sometimes, it may be okay if you cannot comprehend some details. However, you should now be able to see the main idea of the paper. Otherwise, it might be better to rest and go through the second pass without entering the third. 

This is a good time to summarize the paper. During your reading, make sure to make notes.

After the second pass, you can: 

  • Return to the paper later(If you did not understand the basic idea of the paper)
  • Move onto the thirst pass.

The third pass (Maximum: four hours)

You should go to the third stage (the third pass) for a complete understanding of the paper. It may take you a few hours this time to read the paper. However, you may want to avoid reading a single paper for longer than four hours, even at the third pass.

A great deal of attention to detail is required for this pass. Every statement should be challenged, and every assumption should be identified.

By the third pass, you will be able to summarize the paper so that not only do you understand the content, but you can also comment on limitations and potential future developments.

Color coding when reading research papers

Highlighting is one way I help myself learn the material when I read research papers. It is especially helpful to highlight an article when you return to it later. 

Therefore, I use different colors for different segments. To manage my references, I use Zotero. There is an inbuilt PDF reader in Zotero. I use the highlighting colors offered by this software. The most important thing is the concept or phrase I want to color code, not the color itself.

Here is my color coding system.

  • Problem statement: Violet
  • Questions to ask: Red (I highlight in red where I want additional questions to be asked or if I am unfamiliar with the concept)
  • Conclusions: Green (in the discussion section, authors draw conclusions based on their data. I prefer to highlight these in the discussion section rather than in the conclusion section since I can easily locate the evidence there)
  • Keywords: Blue
  • General highlights and notes: Yellow

Minimize distractions

Even though I’m not a morning person, I forced myself to read papers in the morning just to get rid of distractions. In order to follow through with this process (at least when you are starting out), you must have minimum to no distractions because research papers contain a great deal of highly packed information.

It doesn’t mean you can’t have fun doing it, though. Make a cup of coffee and enjoy reading!

Images courtesy : Online working vector created by storyset – www.freepik.com

Aruna Kumarasiri

Aruna Kumarasiri

Founder at Proactive Grad, Materials Engineer, Researcher, and turned author. In 2019, he started his professional carrier as a materials engineer with the continuation of his research studies. His exposure to both academic and industrial worlds has provided many opportunities for him to give back to young professionals.

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How to Read Like a Doctoral Student

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In his wildly popular 1986 book, All I Really Need to Know I Learned in Kindergarten , author Robert Fulghum reminds readers of simple lessons they once learned but may have forgotten, lessons such as share everything, wash your hands before you eat, and of course, flush. During the past year, I’ve experienced the opposite of what Fulghum describes. Some things I’ve done my entire post-kindergarten life—that I thought I was pretty good at—I’ve had to relearn.

Things like reading and writing.

You see, I’ve just recently finished the first year of a business doctorate and the program forced me to revisit reading and writing skills I’ve always taken for granted.

In a recent twitter thread, I described my admittedly still brief experience in the program:

1/ Coming from industry to work on a business doctorate, many friends ask first, "Why the hell would you do something like that?" Then, they follow with, "So what do you do in a doctorate?" #phdchat — Kevin P. Taylor (@ktaylor) May 30, 2018

When friends, family, and people in my industry hear that I am pursuing a doctorate in my forties after a career in technology and entrepreneurship, they fall into one of two camps.

Firstly, there are the people who subconsciously savor the sight of a train wreck. These are the people who slow down and lean over to get a better view when passing a three-car pileup on the highway.

From these dear friends and relatives, I hear comments such as, “Wow, kudos to you but I’m so done with school. No way! So, what does it involve, anyway?”

When I tell the second group of friends and family about my educational plans and the “interesting” research projects I am pursuing, I’ll catch a sparkle in eye.

From these folks, I hear comments like, “I would love to do that someday. I almost applied to a Ph.D. program after undergrad but, you know, I had student loans to pay off. So, what does it involve, anyway?”

The short answer is reading, reading, and more reading.

In this blog post, I’ll share five techniques I’ve learned over the past year while learning how to read as a doctoral student, where I’m required to read, retain, and recall large amounts of complex information.

If you must absorb and make use of large quantities of information (everyone?), then you too will benefit from learning the powerful—but not easy—reading techniques that follow.

This is not the reading you learned in kindergarten.

5 Advanced Techniques to Learn How to Read More Effectively

In the past month, I’ve read 575 pages from scientific journals and academic book chapters in electronic format (either a PDF or a Kindle book). I’ve read several hundred additional pages in paper books.

This is a normal reading load in my program.

The reading doesn’t always go smoothly. Many time over the past year—usually after 10-12 hours of binge reading—my eyes would quiver and water.

At one point I could no longer focus my eyeballs on words. Imagine that feeling when trying to do your…let’s imagine…50th push-up but your arms just stop taking orders from your brain.

So, how do doctoral students read so much dense material and keep it all straight? Scientific articles are not reading cliffhangers. No Harry Potter or The Hunger Games 1 for doctoral students.

And, just as important, how do doctoral students retain and recall everything we’ve read?

During the first few months of my doctoral studies, it was clear I was coming into the program ill-equipped for the amount and type of reading that was expected. The techniques that follows are what I found work best for me. 2

Read with a Purpose in Mind

Do you read novels at work?

Probably not, if you’re like most people. You have job to do, for crying out loud. But, when you read like a doctoral student, reading is your job. You must treat it as such.

Keeping that in mind, every time I crack open a book or journal article, I do so with a clear purpose in mind.

I read to accomplish a predefined goal. When done, I don’t linger in the material, I move on. If you don’t take anything else away from this article, remember to read for a specific purpose.

Let’s look at some reasons I might need to read something. Depending on your job, you may come up with a different list.

Purpose for Reading

  • When I start a new research topic, I likely don’t know much about it. I won’t be sure what research questions 3 to ask. What has already been discussed and researched? Who is writing and working in the area? When doing this type of survey-level reading, I stay at 30,000 feet. My goal is to understand terminology, categorization, schools of thought, common research methods, seminal works, and prolific authors.
  • The world evolves over time and scientific knowledge is no exception. The state-of-the-art knowledge a year ago could now be refuted, retracted, or otherwise out-of-favor. Assuming I’ve developed a specific research question on a topic and understand the area broadly, I’ll want to delve into the specifics—detailed information on hypotheses, constructs, phenomena, models, methods, and theories.
  • If I have a general understanding of a topic and know the current state of knowledge, I’ll want to learn what gaps exist in the current knowledge about a topic (e.g. the effect of passion on launching new ventures). If I have a specific question in mind, has it already been answered? If it has, am I convinced the answer is plausible? Or, are there reasons to doubt (e.g. are currently accepted conclusions built on shaky research or are the conclusions over-generalized)? If my research question hasn’t been answered yet, this could point to a possible research opportunity.
  • Sometimes I need to acquire a new skill. For instance, I may need to test the reliability of a set of survey questions or I may need to perform a statistical analysis that I haven’t used before. In what ways have previous researchers already done the same things? (Precedent is important in science.)

Your method of reading should be driven by its purpose. To gather the right level of information with the least time investment, I read in layers.

Read in Layers

Imagine a journal article or academic book is an onion. Both consist of layers of material. And, both can make you cry.

Thinking of reading material as a series of layers to be peeled focuses my time and energy on only the layer that will best serve my purpose at that moment.

Layer One Scanning

The first layer of a piece is its outer shell. Layer one scanning reveals the most basic information. I use that information to decide if it is relevant to my purposes.

The output of layer one scanning is simply a list of relevant pieces I will later read for layer two survey-level information.

For a journal article, 4 the first layer is comprised of just the title and abstract.

Together the title and abstract should contain enough information to decide if the article warrants closer examination.

The first layer of a book includes its title, cover material, table of contents, and any relevant book reviews.

If I believe a piece could be useful to my research, I move it to a second layer reading to understand its background, conclusions, and key points.

Layer Two Reading

Layer two reading is the scientific equivalent of CliffNotes™.

The second layer of a journal article is comprised of the abstract, introduction, and conclusion, also known as the AIC . In layer two reading, I quickly read the abstract, introduction and conclusion and lightly skim the method and analysis sections and all tables and figures.

A book’s second layer consists of its preface, introduction, table of contents, chapter introductions and conclusions, and, again, any figures and tables. In addition, I skim the body of each relevant chapter looking for important nuggets. This will give me a fair approximation of a book’s contents with only a few hours investment.

Layer Three Reading

The third layer of a piece represents its nitty-gritty details.

A third layer reading is a full, detailed examination of the entire piece (article or book). At this level of reading, I engage deeply with the material, reading it front to back, closely examining every figure and table, every claim or finding, every step of its narrative.

Clearly, I reserve third layer reading to pieces that are highly relevant to my topic of interest.

While reading each progressive layer of material, I highlight and annotate. In other words, I engage the author in a conversation via the margins of the piece.

Converse with the Author

Active learning increases information retention and recall. In fact, systems such as the SQ3R Method provide a well-trodden approach to active reading.

My version of active reading includes reading in layers (action) and conversing with the author (another action) at increasing levels of detail. Conversing with the author requires both systematically highlighting text and scribbling comments in the margins.

The deeper I read, the more I converse. The conversation should heat up as I develop a more nuanced view of the piece.

Highlight and Annotate

When I read in layer two, focusing on the abstract, introduction, and conclusion, I highlight the most important points in yellow, usually less than one sentence per paragraph. Orange highlighting designates supporting points, while sky blue marks any references I need to further examine.

In addition to structured highlighting, I write brief notes in the margins, questions, cross-references, etc. I specifically annotate the following:

  • Purpose of the piece,
  • Gaps addresses,
  • Gaps not addressed,
  • Sketch out the theoretical model,
  • Hypotheses,
  • Sample and methods used (survey, experiment, etc.),
  • Findings, and
  • Obvious inconsistencies, questions, or cross references to related material.

Make Up Your Own Shorthand

I use my own homemade shorthand:

  • “RI” is for a research idea,
  • “Q” is for a question,
  • Empty Square is a to-do item (i.e. a checkbox),
  • “Gap” identifies a gap in the literature,
  • “RQ” is the piece’s research question.

Here is an example of an article I recently read at layer three for a research methods class:

Alt

Consume instead of Preserve

If you are anything like me, you love books. You probably have stacks of books sitting near your chair as you read this. Like me, you might even have some in protective covers.

Alt

But when I read to learn, I consume my material. I destroy books and journal articles with highlighters and red pens.

Yes, deface, mutilate.

Here’s a recently defaced PDF:

Alt

I should be clear, though. I only deface books in electronic format or books still in print that I can easily replaced.

If a book is out-of-print or borrowed (e.g. from a library), I never mark in it but instead use plenty of sticky notes.

The point is that purposeful reading of a book or article is important work. Work often requires consuming resources.

The book or journal article is there to serve my purpose.

Summarize and Synthesize the Material

After spending time reading, highlighting and annotating an article or book, it is time to put the new information in context and make sure it is available for future recall.

Unlike the ancients and their method of loci 5 people today are not trained to retain and recall vast quantities of detailed information using memory alone.

Instead of trying to remember everything using my sketchy-at-best memory, I use a structured process of summarizing and synthesizing new information. How in-depth I do this depends on the reading layer in which I’m operating.

During layer one reading I’m simply trying to collect and organize relevant sources for later use. During my searches, if a piece looks interesting based on its title and abstract, I simply import the reference into Zotero 6 7 , my citation management software.

After a layer two reading, I will have highlighted and annotated the most important parts of the book or article. Immediately after reading—or better, while reading—I put notes into a structured Google Sheet called a “conceptual synthesis worksheet.”

Alt

I create one conceptual synthesis worksheet for each important keyword or concept in my research topic. These worksheets also correspond to the subfolders in my Zotero citation management software. For example, a current project has worksheets and Zotero subfolders for the following topics: Entrepreneur Personality, Angel Decision-Making, Angel Motivation, and Angel Investor Characteristics.

After layer two reading, in addition to populating a row in a conceptual synthesis worksheet, I often write (meaning sometimes write) a prose summary and synthesis of the piece in a structured “Journal Reading Summary Form.” In the JRSF, I address the following questions:

  • What is the aim of the research? Specifically, what “big picture” practical question is highlighted and what more focused research question is addressed?
  • Why should anyone care?
  • What major theory(ies) are used to support the work?
  • What methods are used to test the study’s hypotheses or research questions?
  • What are the major findings/conclusions?
  • What are the most important contributions of the research?

Early in my doctoral program, a professor handed out these questions to the class. But, there are several “how to read a journal article” documents floating around the Internet with similarly structured note-taking forms.

Layer three reading helps develop a deep understanding of a piece. In my experience, this only occurs after attempting to synthesizing the material with other research I’ve read and with my own thoughts.

Layer Three

Synthesizing material during level three reading requires developing an understanding of how the piece relates to the work of others and the work that I am doing. This is where I really question the material, think critically. Question everything: assumptions, methods, sample, validity, and reliability. Where are the contradictions? Do the conclusions make sense in the real world? What are the flaws (all research is flawed) and how could those flaws be overcome in future research?

I use one of two ways to synthesize material during layer three reading (deep reading). If a piece is not immediately needed, I write a stand-alone memorandum and store it in Zotero.

If I need the synthesis for a current project, I might also create a shortened version of the memorandum and include it in the project’s annotated bibliography , if it exists. In any case, I also save the AB entry in Zotero for future use.

Go Read Like a Doctoral Student

Whether you are a doctoral student, an entrepreneur, or engage in other knowledge work, the skills to efficiently filter through large amounts of information and purposefully capture and use just what you need can be a competitive advantage.

For example, I follow over a thousand blogs in my Feedly account . I check my account once a week or so and there are always hundreds of new posts.

I use similar techniques to what we’ve explored in this article to quickly scan at layer one, survey-level read at layer two and, rarely, dive deep at layer three. Blog posts and web pages that pass my layer one scan go into an Instapaper folder until I have time to read it at layer two.

My challenge to you today is, think about what we’ve discussed in this article. How can you use these techniques to stop reading…all…the…words…in a book or article and just read to accomplish your specific purpose?

What information organization system can you set up this week using Zotero, Evernote, Feedly, Instapaper, Google Drive, etc. to organize and manage the information you consume and want to recall?

Robert Fulghum, the author of All I Really Need to Know I Learned in Kindergarten shared many useful lessons from kindergarten. But, even he assumed reading was a given. But reading at an advanced level, for a purpose, takes a systematic approach. Now you have the necessary tools to do just that.

Share this post:

  • Well, unless you happen to be a scholar researching Harry Potter or The Hunger Games .
  • The techniques are not my invention and have been shamelessly borrowed from other smart people.
  • Good research questions are ones that investigate something interesting, that are valuable either practically or theoretically, and that can possibly be answered given the researcher’s resources, time frame, and skill set.
  • Journal articles follow consistent formats. Quantitative articles often contain an abstract, introduction, method, analysis, discussion, and conclusion section.
  • Also know as memory palaces.
  • Zotero has a powerful “Connector,” or browser plugin, that makes it easy to import sources directly from web pages and library databases.
  • Each of my writing projects might use 5-8 Zotero subfolders to organize the material. You could alternatively use another citation database, or even Evernote , Google Drive , or Dropbox for organization.

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Thanks a lot for this article, so helpful as a new PhD candidate. I especially liked the Layer reading method and conceptual synthesis worksheet.

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Thanks, Sarah — good luck with your PhD.

' src=

This is really a helpful article,I have gotten a couple of nuggets from it,I plan to use them during my researches.Glad I stumbled on this article.

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Really helpful article. I know I am replying multiple years later, but I have a question. How do you do all this and still read multiple journal articles? It takes me several hours just to finish a single article by reading through, so I can barely get to the next article I have to read. What enabled you to do all of this layered reading and writing for one paper that you read and still be able to read other papers without it taking millenia?

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Scott, thanks for the questions. In short, the point of the layers is to save myself time. I only read papers at layer 2 if layer 1 indicated it is relevant to my project. If not, I’ve just saved myself a lot of time. Layer 3 papers are the ones I spend the most time with but those are the most important papers and deserve the time.

If you are taking several hours to read each paper, let me reassure you that it will get faster, especially if you use a triage system like the one I describe here. As you get to know a particular literature well, you will skim much of the front end of a paper because it’s repeating what you already know. You’ll be looking for the results and any anomalies or issues with the methods.

Good luck in your journey.

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Wow I read this and got inspired, I did not feel anxious about the idea of reading until my eyes hurt or felt some discomfort. Wonderful writing! This is an article most PhD students need to see.

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Thank you for this information. The conceptual synthesis worksheet will be very helpful to current and future research and assignments.

You’re welcome!

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Kevin- This is awesome and incisive work. Love the practicality. Well Done!

Thanks for reading!

Glad you enjoyed the post. Thanks for the recommendation for “Digital Paper.” I’m eager to learn more techniques. I’ve read the skimming, scanning, extracting terminology the book description mentions but it looks like it is more extensive than what I’ve seen previously. I’ll check it out.

' src=

Great writeup Kevin!

I wanted to pass on a related reading, “Digital Paper” by Andrew Abbott (Sociology prof @UChicago), which is about the art of scholarly library research. He has 7 stages (“design, search, scanning/browsing, reading, analyzing, filing, and writing”), which has some similarities to how you outlined your process in this post.

http://www.press.uchicago.edu/ucp/books/book/chicago/D/bo18508006.html

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  • CAREER COLUMN
  • 07 July 2022

How to find, read and organize papers

  • Maya Gosztyla 0

Maya Gosztyla is a PhD student in biomedical sciences at the University of California, San Diego.

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“I’ll read that later,” I told myself as I added yet another paper to my 100+ open browser tabs.

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This page contains resources on how to be a better reader (for specific help on reading journal articles look under the Find Articles tab). It also includes various ideas on note-taking, and ideas and strategies for studying. There are written articles/editorials and videos. Resources are listed in no particular order. 

Please review for what works best for you. If you have a method that you find works better for you that is not here, please let me know so I can include it! 

Need help with writing? Try these resources from the University of North Carolina. 

  • Videos on reading
  • Note-Taking
  • Videos on Note-taking
  • Videos on studying
  • Aimed more towards for-fun reading, but has some good advice
  • Again towards for-fun reading, but has tons of additional links and good advice. 
  • How to improve reading comprehension advice
  • Reading a textbook  quickly and effectively

There are a bunch of videos in the next tabs that discuss a variety of different types of reading strategies - how to read faster, how to read a textbook, how to increase reading comprehension, etc. 

  • Taking notes while reading from the University of North Carolina
  • 5 Effective Note Taking strategies from Oxford Learning.com
  • 5 Note Strategies, with written and video  explanations. And Street Fighter characters to illustrate. 
  • Not techniques so much as practical advice
  • 36 Examples and Free Templates on the Cornell Method
  • Blank note taking templates
  • LifeHack notetaking tips

  • The complete study guide for every type of learner - explains different kinds of learners and what study methods might work best for you based on how you learn information best
  • Studying 101: Study Smarter Not Harder : from the University of North Carolina
  • Studying Guide from Oregon State University

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how to read phd

  • How to Read a Journal Article
  • Doing a PhD

As a PhD student (and anyone involved in research) you’ll be reading a lot of journal articles; you’ll come across of hundreds of papers, some of which will be very relevant to your research and others that won’t be. So how do you approach the art of paper reading to ensure you’re efficient and also that you get the most from them? Well, there are many ways! Some academics prefer to go from start to finish, taking in each word, whilst others have a strategy of reading specific sections first. We prefer the latter – here are a few tips from us to try out:

We suggest using a three-pass strategy where you take in more detail on each pass and decide at each stage if there’s enough there for you to spend more time on.

1. Pass One

Use your first view of the paper to get a quick feel of what the papers about. This is a max 10-minute task after which you decide if you need to spend any more time on this paper. We suggest:

1. Read the title, abstract and the aims/objectives, usually found at the end of the introduction

2. Read through the headings used throughout the paper (but not the content under them at this stage)

3. Read the conclusions

After this first glance over the paper, you should (1) have an idea of what type of paper this is (e.g. experimental study, the development of a new method etc.), (2) the main things that the authors did and (3) what the take-home messages were. You should also be able to tell at this stage how well the paper is written. From the information gleaned from the first pass, it’s up to you now if there’s enough interest from you to give it a second more detailed read or if this paper doesn’t interest you or it’s too difficult to understand.

2. Pass Two

If you decide to spend more time on the paper, this second pass is the time to take in the paper’s content. Go through the methodology in detail – does it make sense? Is this how you would do things? What results are presented? Graphs, figures, tables? Do they make sense? Have the appropriate statistical analysis methods been applied? You should be able to summarise and explain what this paper’s about to someone else after this pass.

3. Pass Three

This final pass is an opportunity to think about how the paper fits in the context of your research. Have the authors presented new data or knowledge that could affect or change the direction of your work? Have they identified or presented new gaps in knowledge that you could address in your research? Equally important here is to make sure you’re clear on the limitations of the study and what assumptions the authors have made. Thinking about the methodology, would you be able to recreate the results? Would you be happy making the same assumptions or would you do things differently?

As the last point – think about these same steps when you’re writing your own papers !

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5 must-reads for doctoral students

January 11, 2016

The decision to pursue a doctoral degree can be exciting and scary at the same time.

Good preparation will ease the path to writing a great dissertation. Reading some expert guide books will expand your knowledge and pave the way for the rigorous work ahead.

Capella University faculty, doctoral students, and alumni recommend these five books for doctoral students in any discipline.

1. How to Read a Book: The Classic Guide to Intelligent Reading  by Mortimer J. Adler

“One book fundamental to my doctoral education that my mentor had my entire cohort read, and which I still recommend to this day, is  How To Read a Book , which discusses different reading practices and different strategies for processing and retaining information from a variety of texts.” – Michael Franklin, PhD, Senior Dissertation Advisor, Capella School of Public Service and Education.

Originally published in 1940, and with half a million copies in print,  How to Read a Book  is the most successful guide to reading comprehension and a Capella favorite. The book introduces the various levels of reading and how to achieve them—including elementary reading, systematic skimming, inspectional reading, and speed-reading.

Adler also includes instructions on different techniques that work best for reading particular genres, such as practical books, imaginative literature, plays, poetry, history, science and mathematics, philosophy, and social science works.

2. Dissertations and Theses from Start to Finish  by John D. Cone, PhD and Sharon L. Foster, PhD

This book discusses the practical, logistical, and emotional stages of research and writing. The authors encourage students to dive deeper into defining topics, selecting faculty advisers, scheduling time to accommodate the project, and conducting research.

In clear language, the authors offer their advice, answer questions, and break down the overwhelming task of long-form writing into a series of steps.

3. Writing Your Dissertation in 15 Minutes a Day  by Joan Balker

This book is recommended for its tips on compartmentalizing a large project into actionable items, which can be helpful when working on a project as mammoth as a dissertation. Balker connects with the failure and frustration of writing (as she failed her first attempt at her doctorate), and gives encouragement to students who encounter the fear of a blank page.

She reminds dissertation writers that there are many people who face the same writing struggles and offers strong, practical advice to every graduate student.  Writing Your Dissertation in 15 Minutes a Day  can be applied to any stage of the writing process.

4. From Topic to Defense: Writing a Quality Social Science Dissertation in 18 Months or Less  by Ayn Embar-Seddon O’Reilly, Michael K Golebiewski, and Ellen Peterson Mink

As the authors of this book state, “Earning a doctorate degree requires commitment, perseverance, and personal sacrifice—placing some things in our lives on hold. It is, by no means, easy—and there really is nothing that can make it ‘easy.’”

This book provides support for the most common stumbling blocks students encounter on their road to finishing a dissertation. With a focus on a quick turnaround time for dissertations, this book also outlines the importance of preparation and is a good fit for any graduate student looking for support and guidance during his or her dissertation process.

From Topic to Defense  can be used to prepare for the challenges of starting a doctoral program with helpful tools for time management, structure, and diagnostics.

5. What the Most Successful People Do Before Breakfast: A Short Guide to Making Over Your Mornings—and Life  by Laura Vanderkam

According to author and time management expert Laura Vanderkam, mornings are key to taking control of schedules, and if used wisely, can be the foundation for habits that allow for happier, more productive lives.

This practical guide will inspire doctoral students to rethink morning routines and jump-start the day before it’s even begun. Vanderkam draws on real-life anecdotes and research to show how the early hours of the day are so important.

Pursuing a doctoral degree is a big decision and long journey, but it also can be an exciting and positive experience. Learn more about Capella’s  online doctoral programs .

What's it like to be a doctoral student?

Learn more about the experience, explore each step of the journey, and read stories from students who have successfully earned their doctorate. 

Explore The Doctoral Journey >>

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Adventures of a PhD candidate

Reflections on the thesis journey

how to read phd

The way I take notes for my PhD

In high school I was really bad at taking notes and studying. So much so that I barely got into a university degree! In my undergraduate I slowly learnt tricks for studying and remembering all the things I had to do. But when you begin a PhD, it is quite honestly a whole new ball game. The things you read you will need to be able to find, and remember in two or three years time!

Everybody has a different process, but I thought I would outline mine in this blog post. I’ll begin with a confession;  the thought of PDFs in folders has always scared me.  To me, the idea of knowing what a file is by the way I name it and being able to find the things I have highlighted a year later seemed (and still seems) impossible. I honestly do not know how people just use PDFs on their computer to remember all of the things they have read (hats off to those who can do that!). In the beginning of my PhD I printed every article I read, so I could file it manually ( my inspiration here ). I still think this is the best method for me, but I have had to adapt it due to overseas fieldwork (can’t exactly drag printed articles around the world with me).

Below I detail the steps I take when reading an article/book/whatever for my PhD.

Manually enter the article into EndNote

I know some (most?) PhD students import database searches into their EndNote libraries and work from there. But I have two issues from this:

  • You have to check the references to ensure authors don’t have different name versions (otherwise in documents your EndNote will automatically treat them like two authors who have the same last name and first initial).
  • How do you know what you have read? Or where to start reading?

I manually enter the details to avoid this. In the beginning I used the EndNote keyword feature to help find articles I had entered, but now I do not do this (as I use Nvivo and it is easier to find things and it is a bit redundant with the way I file articles). In my endnote I simply add all necessary bibliographical information and attach the PDF (my back up in case of catastrophic tech failure). I also use the endnote online to sync my library to the cloud.

Add an annotated bibliography entry to my scrivener

This annotated bibliography is whatever I am thinking/feeling at the time. Some entries are more detailed than others. See the example below:

screen shot 2019-01-29 at 2.23.30 pm

I have blocked the first two entries APA reference as I am quite critical in my entry of them (not quite ready to have such a strong academic voice just yet). You will notice how all four of the entries are quite different with what they identify and talk about. I don’t follow a set pattern for these, it is quite literally my thoughts. For most it is a summary of what the article said and my thoughts. This is a good way to begin to think critically about all of the things you read.

Add some writing to my scrivener file

This part has helped me to actually start writing. Since the beginning of my PhD I have always added sentences to my Scrivener file to match the article I am reading. For example:

Screen Shot 2019-01-29 at 2.30.31 pm.png

This is my scrivener file for my whole PhD. On the left side you can see I have folders set up and each of these contains sub-folders and text within. The top ones are actual chapter drafts that I have begun working on and the ones filed under ‘research’ are things I have randomly written that I am unsure if I will need/what chapter they will be in. The text in this screen here is an example of where I have begun to write about postcolonialism and education. Notice how I have written sentences about what Matereke argues, but also included a quote I think might be relevant. When I begin to write this section later, I can use these as starting points to construct an argument that flows (and actual paragraphs). I will also know what authors I have read who are related to this area. My other files generally have more writing in them than this, but I chose a small example in case someone wants to read the text (to see what I mean)! Let me know if you want more detail on using Scrivener for a PhD!

Code the article in Nvivo

I have already discussed this in my blogpost:  Nvivo for a literature review: How and why . I use Nvivo to help me sort my PDFS and find quotes that I like, or in general sentences that I think are really eloquent and helpful at understanding a concept. For example:

screen shot 2019-01-29 at 2.35.38 pm

A quick glance at my code for ‘colonialism’ allows me to see some ways of writing about colonialism and allows me to remember the key words that are used when discussing this concept (‘civilising mission’ ‘racialised hierachies’ etc).

In conclusion…

I hope this blog has helped you understand the way I take notes, as I have managed to transform from a person who was completely analog with note taking (in undergraduate) to able to work digitally. Not only do I work digitally, I always know where my readings are, how to find something quickly and I don’t start writing with a blank page!

If you are just beginning your PhD, don’t be afraid to find the system that works for you by experimenting with a jigsaw of other people’s methods!

Share this:

10 thoughts on “ the way i take notes for my phd ”.

Thank for sharing Kate. It is a very helpful article.

I’d like to hear bout how you use Scrivener for your PhD, I have not heard bout it until I read your post 🙂

I would also like to hear more about using Scrivener for you PhD! I will be beginning a doctoral program this fall and would love to have a good organization system for articles and research ideas.

Pingback: How I plan in my PhD/Organise my desk – Adventures of a PhD candidate

Love seeing Scrivener incorporated within a note-taking system. Scrivener is probably the best tool in my PhD portfolio! Love it! For those asking, there’s heaps of how-to videos and blogs about using Scrivener for academic work.

thankyou so much. and much love from indonesia… 🙏

The notes you made under education and postcolonialism, did you just keep that in a list of notes with different themes under Research?

And what is Good things docu… just curious 🙂

Hi, yes I just kept them there. In the screenshot I believe you can’t see all my subheadings and folders. I eventually sorted my notes via how I anticipated my chapters would work out so more in headings and subheadings. Then I wrote my actual chapters!

The good things document is where I keep nice feedback I have received etc. it helps when you feel down to be able to see some positive feedback 🙂

Pingback: 3 Other Methods for Taking Notes in your PhD – Adventures of a PhD candidate

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9 Note-Taking Tips For PhD Research

Effective note taking

Taking notes when writing a PhD dissertation or thesis is one of the most important yet daunting tasks for any PhD student.

How you take notes can either make or break your PhD experience.

Luckily, there are some useful tips from previous PhD students that can make this task easier and simpler and make the writing of the PhD dissertation or thesis less tiresome.

This post is a collection of top 9 note-taking tips that have proved to be most useful and effective for majority of PhD students.

1. Choose a note-taking medium that works best for you

Some people work best with the good old paper and pen, while others are more comfortable with digital apps.

The medium doesn’t matter as long as it works for you.

2. Take notes as you read

Every time you read a material, take notes simultaneously. Do not wait to take notes afterwards as the human mind is bound to forget important points.

The reading should be active rather than passive. Active reading ensures that you critically analyse what you are reading and place it in the larger context of your own research and the research done by others.

Ask yourself questions such as:

How does this material support my own research? How relevant is it to what I am doing? Where does it fit in my own paper (does it support my background to the study or fits better in the research methodology)? How does the material relate to what others have written on the same topic? Do the findings support others’ findings or do they contradict them? If the findings contradict previous research, what could explain the contradiction?

For a PhD student, active reading and note-taking is a necessity because you are expected to contribute to the body of knowledge in your field of study.

3. Include full references in your notes

The notes for each material read should start with the reference in the reference style recommended by your school or department.

Referencing your notes cannot be overemphasised.

This will save you lots of time when you start inserting in-text citations and compiling reference lists or bibliographies in your dissertation. You won’t have to worry about where certain notes came from and will save you the headache of going back to look for the correct reference.

4. Include some direct quotes

Direct quotes are useful in some cases as long as they stand out and are not just mere general knowledge. They may include: statistics or data that are relevant to your own research, some interesting findings from the research or the author’s unique interpretation of an issue, etc.

Always include the page number of the material where the quote was borrowed from. Direct quotes have to be referenced together with the page number.

5. Have a system for differentiating your own thoughts from the author’s writings

This is useful for avoiding plagiarism.

It is advisable to write the notes in your own words as much as possible. But sometimes it is impossible to avoid noting down exactly what is in the material even if it will not be used as a direct quote. This is especially the case if you want to remember some points the author made in the material for future reference without having to re-read the material again.

In this case, you need to put a system in place that helps you differentiate your own notes from the writings of the authors. You can use for instance a colour coding system where your own notes are marked by a colour of your choice, the author’s writings are marked by a different colour and the direct quotes are marked by a separate colour.

If you go by a colour coding system, then having key for the different colours used in your notes will be useful to avoid confusion as you go along.

An example of key for colour codes would be:

Red = own notes Blue = author’s writings Yellow = direct quotes

6. Make sure to digitise manual notes

Both pen-and-paper methods and digital methods have their pros and cons.

One advantage of using the pen-and-paper method is that it makes it easier to have clarity of thought. You can also easily add your own comments or insights to the notes.

“Plan in Analog — spend time in analog before jumping to digital” ―  Carmine Gallo,  The Presentation Secrets of Steve Jobs

The downside to pen-and-paper method is that the notes can easily get lost or rendered useless, for instance, by spillage.

The other downside to pen-and-paper method is the inability to find something easily. It is time-consuming to peruse through hundreds of pages looking for specific things. Whereas in digital media you can easily use the control F function to find whatever you are looking for.

It is therefore important to digitise manual notes using Microsoft Word or note-taking apps

7. Organise your notes by topics and sub-topics

Instead of organising your notes by authors (like we do in annotated bibliographies ) or by dates, it is best to organise them by topics and sub-topics.

For instance, have a folder for the introduction chapter and create separate files for each sub-topic under the introduction chapter such as: the background to the study, the problem statement, research gap etc.

Do the same for each of your proposal’s or dissertation’s chapters including literature review, research methodology, results and discussion, and lastly the conclusion chapter.

This kind of notes’ organisation will come in handy when writing the proposal or the full dissertation. It will save you time spent going through the notes looking for notes that fit in each of the chapter and their sub-topics.

8. Integrate note-taking with dissertation writing

What I mean is: do not spend a whole year reading materials and taking notes only without writing drafts of the dissertation (or the proposal).

Always write something towards your dissertation on a regular basis.

As an example, you may decide that every Friday you will write 500 words of your dissertation to start with, and then increase the number of words you write as you progress along. So every Friday make use of the notes that you have made at that point and write a sub-topic of your dissertation.

If in the first year you write at least 500 words per week, you will have written at least 26,000 words of your dissertation at the end of the first year. You will then realise that after a while you are able to write 1,000 words and even more in one sitting. The more you write, the easier the writing task becomes.

Keep in mind though, that whatever you write at the beginning is just a draft that you will revise a number of times before it becomes PhD-standard material.

Another important thing to do when writing the drafts of your dissertation is to build the bibliographies or reference list simultaneously, rather than waiting to do this task at the end of your PhD program. Not only will this strategy save you time and headache but it will help you avoid many mistakes in the referencing at the end.

While building your bibliography or reference list be mindful of the required referencing style and always refer to the referencing style manual, even if you are building it with digital softwares such as Zotero. The digital softwares are not always accurate therefore the human eye is a necessity.

9. Build mind maps as you take notes

Mind maps are visual illustrations of the relationships between various concepts. While building the mind maps, include the sources in the notes for easy referencing.

Sample of a mind map

You can build mind maps manually (using pen and paper) or digitally using available mind mapping tools for the different operating systems (such as SimpleMind Pro for MacOS).

Final thoughts on Note-Taking for PhD Students

Effective note-taking habits and strategies form the foundation for an A-graded PhD dissertation. While some students prefer the good old manual tools, more have embraced the digital world. However, each of these platforms has its pros and cons. The best thing would be to have a blended system that incorporates both worlds. This post provides useful tips for taking notes that feed into PhD research thereby making the writing task less daunting.

Related post

How to Take Notes Effectively using OneNote (A Step-by-Step Guide)

Grace Njeri-Otieno

Grace Njeri-Otieno is a Kenyan, a wife, a mom, and currently a PhD student, among many other balls she juggles. She holds a Bachelors' and Masters' degrees in Economics and has more than 7 years' experience with an INGO. She was inspired to start this site so as to share the lessons learned throughout her PhD journey with other PhD students. Her vision for this site is "to become a go-to resource center for PhD students in all their spheres of learning."

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From PhD to Life

Recommended Reading

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Note: As an Amazon Associate, I earn from qualifying purchases. In other words, I may earn a small commission if you click on a link on this page to purchase a book from Amazon.

This list is aimed at graduate students, postdocs, and other PhDs who are actively looking for paid employment or exploring career options. It includes both practical resources, books that combine advice with inspiration, ones that hope to advocate for better systems while also breaking things down for job seekers, as well as memoirs and novels. The focus here is on books written for graduate students and PhDs, but I’ve also included what I think as key or otherwise useful texts with a much broader intended audience.

What’s not on this list? Books that focus almost exclusively on graduate school itself are generally omitted (exception: Berdahl and Malloy, for its framing of the whole thing as part of your career). There are great ones in this category, including Jessica McCrory Calarco’s A Field Guide to Grad School , Malika Grayson’s Hooded: A Black Girl’s Guide to the Ph.D. , Robert L. Peters’s Getting What You Came For and Adam Ruben’s Surviving Your Stupid, Stupid Decision to go to Grad School . See also Gavin Brown’s How to Get Your PhD: A Handbook for the Journey , which features an essay by me! Similarly, books that focus on academic careers (once you’ve got one) aren’t included (example: Timothy M. Sibbald and Victoria Handford, eds., The Academic Gateway ), nor are books that focus on navigating a career beyond the ivory tower. There are lots of books about academic writing and publishing, conducting and producing research, doing a dissertation, and related stuff. These aren’t included either.

Something missing? I occasionally update this list, so let me know what you think I should add or change.

Books for PhDs

This list is in alphabetical order by author’s last name. Some of these books are inexpensive; others are not. Most should be available via your university or local library, or even from your institution’s career services centre.

Fawzi Abou-Chahine, A Jobseeker’s Diary: Unlocking Employment Secrets (2021).

The short guide is directly aimed at PhDs, especially folks from STEM disciplines. Folks in the UK seeking roles in the private sector will certainly benefit from this book.

Susan Basalla and Maggie Debelius, “ So What Are You Going to Do with That?” Finding Careers Outside Academia (3rd ed., 2014)

The best guide to figuring out your life post-PhD written by two humanities doctorates who’ve been there, done that. Includes many profiles of fellow (former) academics who’ve transitioned to careers beyond the tenure-track.

Loleen Berdahl and Jonathan Mallow, Work Your Career: Get What You Want from Your Social Sciences or Humanities PhD (2018).

I loved the authors’ emphasis on getting clear about what you want, and the advice to reflect at each stage of the graduate school process whether continuing on is the right one. It is refreshing to read a book on graduate school that neither presumes academia is the desired career outcome nor implies it ought to be. Instead, the authors encourage readers to keep their options open and rightly point out the benefits of varied work experience, training, and professionalism to careers within and beyond the Ivory Tower.

Natalia Bielczyk, What Is Out There for Me? The Landscape of Post-PhD Career Tracks (2nd ed., 2020).

A Europe-based computational scientist turned entrepreneur, Dr. Bielczyk offers an important perspective on PhD careers, one explicitly aimed at STEM folks. The book benefits from Bileczyk’s personal experiences, extensive research — including interviews with dozens of PhDs — and includes lots of specific advice and suggestions. You can subscribe to her YouTube channel and interact with her on social media.

Jenny Blake, Pivot: The Only Move That Matters Is Your Next One (2017)

From the description: “ What’s next? is a question we all have to ask and answer more frequently in an economy where the average job tenure is only four years, roles change constantly even within that time, and smart, motivated people find themselves hitting professional plateaus. But how do you evaluate options and move forward without getting stuck?”

Richard N. Bolles with Katharine Brooks, What Color is Your Parachute? 2021 : Your Guide to a Lifetime of Meaningful Work and Career Success (50th anniv. ed, 2020)

If you read only one book on how to get a job and change careers, make it this one. Bolles has an idiosyncratic writing style but his advice is spot-on. Read my review of the 2019 version here .

The 2021 edition was thoroughly updated by Katharine Brooks, EdD, who is the author of You Majored in What? (below). Great choice! An excellent way to bring a classic up to date, and at a time when good advice and guidance is particularly needed.

William Bridges, Transitions: Making Sense of Life’s Changes  (40th anniv. ed., 2019)

Think you’re taking too long figuring out what’s next? You aren’t! In the pre-modern world, the transition—a psychological process as opposed to simply a change—was understood as a crucial part of life; not so nowadays. But to successfully navigate a transition, an individual has to experience an end, go through a period of nothingness or neutrality, and finally make a new beginning. No part of the process can be skipped or sped through. There are no shortcuts. (Bridges can relate to being post-PhD or on the alt-ac track: He’s got an ivy league PhD and was an English professor until going through an important transition of his own.)

Katharine Brooks, You Majored in What? Designing Your Path from College to Career (updated, 2017)

Dr. Brooks is a long-time career educator who (as of 2020) directs the career center at Vanderbilt University. This book is aimed at a broader audience of students, but don’t let that dissuade you from checking it out. Starting from the assumption that there are plenty of useful clues in what you’ve done and who you are, and filled with great exercises to help you parse them out, the book will take you through the career exploration process and set you up for a successful job search that is based on a sound understanding of what you want to do and how to make a strong case to employers.

Bill Burnett and Dave Evans, Designing Your Life: How to Build a Well-lived, Joyful Life (2016)

From the description: “In this book, Bill Burnett and Dave Evans show us how design thinking can help us create a life that is both meaningful and fulfilling, regardless of who or where we are, what we do or have done for a living, or how young or old we are. The same design thinking responsible for amazing technology, products, and spaces can be used to design and build your career and your life, a life of fulfillment and joy, constantly creative and productive, one that always holds the possibility of surprise.”

Christopher L. Caterine, Leaving Academia: A Practical Guide (2020)

Just published. Dr. Caterine is a classics PhD who transitioned into a career in strategic corporate communications. One thing that’s cool about this book is just that: He’s working in the private sector. Humanities PhDs are much less commonly found in the business world compared to academics with other backgrounds, and I think that’s a shame. Chris shows us it’s possible and how you can do it too. (But it’s fine if you’re looking elsewhere.)

Christopher Cornthwaite, Doctoring: Building a Life With a PhD (2020)

Dr. Cornthwaite is the Canadian religious studies PhD behind the blog and online community called Roostervane . He shares his story in hopes of inspiring those struggling to move forward with hope and strategies to build a career. Check out the online community too, useful for folks searching for non-academic positions as well as individuals launching side hustles or businesses as consultants of various kinds.

Leon F. Garcia Corona and Kathleen Wiens, eds., Voices of the Field: Pathways in Public Ethnomusicology (2021)

A friend of mine contributed a chapter to this. From the description: “These essays capture years of experience of fourteen scholars who have simultaneously navigated the worlds within and outside of academia, sharing valuable lessons often missing in ethnomusicological training. Power and organizational structures, marketing, content management and production are among the themes explored as an extension and re-evaluation of what constitutes the field of/in ethnomusicology. Many of the authors in this volume share how to successfully acquire funding for a project, while others illustrate how to navigate non-academic workplaces, and yet others share perspectives on reconciling business-like mindsets with humanistic goals.”

M.P. Fedunkiw, A Degree in Futility (2014)

I started to read this novel one day and just couldn’t stop until I finished. So many feelings! The main character defends her dissertation (history of science, U of T) at the beginning of the book, and the story ends a few years later. Fedunkiw has drawn on her own post-PhD experiences to write this wonderful book about a group of three friends navigating life, love, and work in and out of academia. Do read it.

Joseph Fruscione and Kelly J. Baker, eds., Succeeding Outside the Academy: Career Paths beyond the Humanities, Social Sciences, and STEM (2018)

Edited volume of contributions, primarily from women in humanities and social science fields. From the description: “Their accounts afford readers a firsthand view of what it takes to transition from professor to professional. They also give plenty of practical advice, along with hard-won insights into what making a move beyond the academy might entail—emotionally, intellectually, and, not least, financially. Imparting what they wish they’d known during their PhDs, these writers aim to spare those who follow in their uncertain footsteps. Together their essays point the way out of the ‘tenure track or bust’ mindset and toward a world of different but no less rewarding possibilities.”

Patrick Gallagher and Ashleigh Gallagher, The Portable PhD: Taking Your Psychology Career Beyond Academia (2020)

From the description: “Each chapter in this book offers tips and key terms for navigating various kinds of employment, as well as simple action steps for communicating your talents to hiring managers. Your ability to conduct research, to understand statistics and perform data analysis, and to perform technical or scientific writing are all highly valuable skills, as are the insights into human nature you’ve gained from your psychology studies, and your ability to think innovatively and work cooperatively in a variety of contexts.”

David M. Giltner, Turning Science into Things People Need (2017)

From the description: “In this book, ten respected scientists who have built successful careers in industry reveal new insights into how they made the transition from research scientist to industrial scientist or successful entrepreneur, serving as a guide to other scientists seeking to pursue a similar path. From the student preparing to transition into work in industry, to the scientist who is already working for a company, this book will show you how to sell your strengths and lead confidently.”

Alyssa Harad, Coming to My Senses: A Story of Perfume, Pleasure, and an Unlikely Bride (2012).

An English PhDs lovely memoir of discovering the wonders of perfume and embracing who she really is. A story of how one intellectual got back in touch with her feelings, a crucial step on the road to post-PhD happiness and fulfillment. Read an excerpt over at the Chronicle .

Leanne M. Horinko, Jordan M. Reed, James M. Van Wyck, The Reimagined PhD: Navigating 21st Century Humanities Education (2021).

This text appeals to both individual PhDs and graduate students figuring out their own pathway forward and faculty members and other university staff working to improve programs and professional development offerings at their campuses. I’m glad to see it out! (I was at the 2016 conference that inspired this book.)

Hillary Hutchinson and Mary Beth Averill, Scaling the Ivory Tower: Your Academic Job Search Workbook (2019)

Two long-time academic coaches wrote this fantastic guide and workbook for the academic job market. They take you step-by-step through the process of understanding how hiring works — and how it works differently for specific types of positions and kinds of institutions, getting sorted for your search, where to find job ads and other crucial information, staying organized, creating all your materials, prepping for interviews, and other considerations. The book also takes a clear-eyed view of academia and it’s challenges for job seekers, both in the US and around the world. This book is an essential companion to your academic job search. Buying the e-book version? Download and print the worksheets here .

Natalie Jackson, ed., Non-Academic Careers for Quantitative Social Scientists: A Practical Guide to Maximizing Your Skills and Opportunitie s (2023).

If you’re at an institution, check to see if you have free access to this ebook via Springer.

Kaaren Janssen and Richard Sever, eds., Career Options for Biomedical Scientists (2014).

From the description: “This book plugs the gap by providing information about a wide variety of different careers that individuals with a PhD in the life sciences can pursue. Covering everything from science writing and grant administration to patent law and management consultancy, the book includes firsthand accounts of what the jobs are like, the skills required, and advice on how to get a foot in the door. It will be a valuable resource for all life scientists considering their career options and laboratory heads who want to give career advice to their students and postdocs.”

Karen Kelsky, The Professor Is In: The Essential Guide to Turning Your Ph.D. Into A Job (2015)

Dr. Kelsky is dedicated to telling the truth about the academic job market. This book expands on and collects in one place her huge archive of advice and information for PhDs — particularly those aiming for tenure-track positions at US universities. There is advice and resources for “leaving the cult” (part X), a section heading that gives you a sense of where she’s coming from! Academic is its own beast, and its idiosyncracies and unwritten, untold norms and rules belie claims of meritocracy. If you’re going to aim for a tenure-track position, make sure you know what you’re going into and how to increase your chances of success where positions are scarce.

Peggy Klaus, Brag: The Art of Tooting Your Own Horn without Blowing It (2004)

In my experience, PhDs are excellent at not tooting their own horns, for lots of reasons, good and less-good. Here’s how you can talk about yourself appropriately in hopes of moving forward in your career. Great book.

Kathryn E. Linder, Kevin Kelly, and Thomas J. Tobin, Going Alt-Ac: A Guide to Alternative Academic Careers (2020).

If you’re doing or have a doctorate and want to be meaningfully employed in or around higher education, you must read this book – and do what it says. It’s full of clear, practical advice and example jobs where PhDs excel. I was impressed with the depth of knowledge and wide-ranging, thoughtful advice presented, useful for career explorers and seasoned professionals both (and everyone in between). It it’s been a while since you’ve taken a long, hard look at your professional situation, this book will help you revisit your goals and provide smart strategies to move your career forward in just the right way for you.

Kathleen Miller et al. (eds), Moving On: Essays on the Aftermath of Leaving Academia (2014)

Featuring an essay by your truly and many other contributions. By the women behind the now-defunct site How to Leave Academia.

Rachel Neff, Chasing Chickens: When Life after Higher Education Doesn’t Go the Way You Planned (2019)

From the description: “So, you have your PhD, the academic world’s your oyster, but teaching jobs, it turns out, are as rare as pearls. Take it from someone who’s been there: your disappointment, approached from a different angle, becomes opportunity. Marshaling hard-earned wisdom tempered with a gentle wit, Rachel Neff brings her own experiences to bear on the problems facing so many frustrated exiles from the groves of academe: how to turn ‘This wasn’t the plan!’ into ‘Why not?’”

M. R. Nelson, Navigating the Path to Industry: A Hiring Manager’s Advice for Academics Looking for a Job in Industry (2014)

Melanie Nelson’s useful guide is aimed at STEM PhDs who already know where they’re headed. She earned a PhD in the biosciences and has worked as a hiring manager in industry for over a decade.

Rebecca Peabody,  The Unruly PhD: Doubts, Detours, Departures, and Other Success Stories   (2014)

A collection of first-hand accounts and interviews with people who’ve travelled in, through, and beyond graduate school. Read my review here .

Katie Rose Guest Pryal, The Freelance Academic: Transform Your Creative Life and Career (2019).

Read this book! Katie Pryal provides helpful advice for getting started with the practical stuff, as well as grounding yourself in the reality of the gig economy. It’s particularly good for arts and humanities PhDs and similar academically-focused folks who think business isn’t for them. Take it from Dr. Pryal (and me): You can do this.

Tom Rath, StrengthsFinder 2.0: Discover Your CliftonStrengths (2017)

Take this one out of your local library to read the descriptions and learn about the concept of (work) strengths. If you want to take the assessment, you can purchase the book outright or do that on Gallup’s website . If you’re newer to the world of work beyond the academy, this book and the description of strengths will give you all kinds of useful words and phrases to use to understand what you enjoy, what you bring to a workplace, and effectively communicate all that to potential employers and professional colleagues. Embracing strengths will give you a positive, forward-looking way of approaching career building, and it can change your life for the better.

Katine L. Rogers, Putting the Humanities PhD to Work: Thriving in and beyond the Classroom (2020)

From the introduction: “This book invites readers to consider ways that humanities graduate training can open unexpected doors that lead to meaningful careers with significant public impact, while also suggesting that an expanded understanding of scholarly success can foster more equitable and inclusive systems in and around the academy.” Good. Do read this one if you’re currently a student or if your work has anything to do with advising students or creating and maintaining the graduate training ecosystem within and beyond institutions.

Martin E. P. Seligman, Flourish: A Visionary New Understanding of Happiness and Well-being (2011)

An update to his bestselling book Authentic Happiness (also worth reading), this introduced me to the concept of PERMA: that to flourish in life and work, you need to consider and evaluate how frequently you experience have positive emotions (P), feel engaged (E), have positive relationships (R), feel what you’re doing is meaningful (M), and have a sense of accomplishment (A). This isn’t about careers specifically, but it might help you reframe what counts as success in your work life, and that’s particularly crucial for career changers.

Melanie V. Sinche, Next Gen PhD: A Guide to Career Paths in Science (2016)

From the description: “Next Gen PhD provides a frank and up-to-date assessment of the current career landscape facing science PhDs. Nonfaculty careers once considered Plan B are now preferred by the majority of degree holders, says Melanie Sinche. An upper-level science degree is a prized asset in the eyes of many employers, and a majority of science PhDs build rewarding careers both inside and outside the university. A certified career counselor with extensive experience working with graduate students and postdocs, Sinche offers step-by-step guidance through the career development process: identifying personal strengths and interests, building work experience and effective networks, assembling job applications, and learning tactics for interviewing and negotiating—all the essentials for making a successful career transition.”

Don. J. Snyder, The Cliff Walk: A Memoir of a Job Lost and a Life Found (1998)

A marvelous memoir written by a former tenure-track professor at Colgate University who was suddenly let go. This is the story of his journey through unemployment. You will relate. What’s neat is to look up what he does now — but do read the book before you do! I quote from the book in this post .

Matteo Tardelli, Beyond Academia: Stories and Strategies for PhDs Making the Leap to Industry (2023)

This book takes readers through a 4-step process to reflect on what they want, explore job options, apply for roles, and conduct job interviews and negotiate offers. This is Dr. Tardelli’s second book for PhDs moving to non-academic careers; his first one is partly a memoir about his own journey: The Salmon Leap for PhDs (2020).

Anna Marie Trester, Bringing Linguistics to Work: A Story Listening, Story Finding, and Story Telling Approach to Your Career (2017)

My friend and colleagues Dr. Anna Marie Trester is the expert on careers for linguists, and more broadly is a great resource for thinking creatively and expansively about the value of your social sciences and humanities education to the wider world of work and career development. Check out her website for more offerings, CareerLinguist.com .

Jennifer Brown Urban and Miriam R. Linver, eds., Building a Career Outside Academia: A Guide for Doctoral Students in the Behavioral and Social Sciences (2019)

From the description: “This career guide examines the rewarding opportunities that await social and behavioral science doctorates in nonacademic sectors, including government, consulting, think tanks, for-profit corporations, and nonprofit associations. Chapters offers tips for leveraging support from mentors, conducting job searches, marketing your degree and skill set, networking, and preparing for interviews. This expert guidance will help you decide what career is the best fit for you.”

Julia Miller Vick, Jennifer S. Furlong, and Rosanne Lurie, The Academic Job Search Handbook (5th ed., 2016)

Pick this one up for trustworthy job market advice and info — the first edition was published in 1992! — and the dozens of sample cover letters, CVs, and statements of various kinds. It covers an array of fields, from professionally-oriented doctorates to STEM and humanities. This book is a beast, and might be overwhelming. Tackle it bit by bit and keep it as a reference as you gear up for the job market, prepare and submit applications, and move along the hiring process toward negotiation and acceptance.

Susan Britton Whitcomb, Resume Magic: Trade Secrets of a Professional Resume Writer (4th ed., 2010)

This was the book I found most useful when I was researching how to write a good resume (as opposed to an academic CV).

Understanding and solving intractable resource governance problems.

  • In the Press
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  • Past projects
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  • Everything Notebook
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Note-Taking Techniques

  • Organization and Time Management
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  • Qualitative Methods, Qualitative Research, Qualitative Analysis
  • Reading Notes of Books
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  • Teaching Public Policy, Public Administration and Public Management
  • My Reading Notes of Books on How to Write a Doctoral Dissertation/How to Conduct PhD Research
  • Writing a Thesis (Undergraduate or Masters) or a Dissertation (PhD)
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  • Regional Development (Fall 2015)
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  • POLI 351 Environmental Policy and Politics (Summer Session 2011)
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  • POLI 375A Global Environmental Politics (Term 1, Sep-Dec 2011)

My students often ask me for advice on how to take good notes. This is a hard task to comply with because, well, it’s been a very long while since I’ve taken a class/course. BUT I do take notes of stuff I read, so this compilation of blog posts should be useful.

A proposed heuristics to discern which analog (Index Cards, Cornell Notes, Everything Notebook) or digital (Synthetic Note, Conceptual Synthesis Excel Dump row) to use for note-taking.

This blog post tries to answer the question that I get asked most often regarding note-taking: when to use an analog or digital note-taking solution, and which one should we use?

How to take notes of a book or book chapter when it is not possible to scribble nor highlight the source. This blog post is intended to showcase how I take notes of a book or book chapter where I am not able to do any highlighting nor scribbling. This means I will discuss the Everything Notebook, writing Index Cards and developing Cornell Notes.

Reading, highlighting, annotating, scribbling, note-taking: A walk-through my digital and analog systems. In this post, I integrate my entire digital and analog workflow on how to take notes and read.

Taking notes effectively. This post is a brief reflection on how I take notes of meetings, conference talks, etc.

Writing a synthetic note off a book or book chapter While this blog post is also connected to my Literature Review ones, this one describes a process that is specific to how to read and take notes. So I’ll include it here and in my Reading Techniques section too.

Note-taking techniques I: the Index Card Method. This post relates to how I use index cards to summarize articles, write notes, etc.

Note-taking techniques II: the Everything Notebook Method In this post, I discuss how I write on my Everything Notebook, which yes, I use for absolutely everything.

Note-taking techniques III: the Cornell Notes Method William Pauk developed the Cornell Notes method to capture information from lectures, but in this blog post I show how I use it to store quotations and notes off readings.

Note-taking techniques IV: Shorthand symbols In this blog post, I explain some of the shorthand symbols I use to write not only on the margins of my highlighted articles and book chapters and papers, but also in my notes everywhere.

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Researching extreme environments

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Emma Bullock smiles while near the back of a boat and wearing waterproof gear, with the ocean and sky in background.

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A quick scan of Emma Bullock’s CV reads like those of many other MIT graduate students: She has served as a teaching assistant, written several papers, garnered grants from prestigious organizations, and acquired extensive lab and programming skills. But one skill sets her apart: “fieldwork experience and survival training for Arctic research.”

That’s because Bullock, a doctoral student in chemical oceanography at the Woods Hole Oceanographic Institution (WHOI), spends significant time collecting samples in the Arctic Circle for her research. Working in such an extreme environment requires comprehensive training in everything from Arctic gear usage and driving on unpaved roads to handling wildlife encounters — like the curious polar bear that got into her team’s research equipment.

To date, she has ventured to Prudhoe Bay, Alaska, five times, where she typically spends long days — from 5:00 a.m. to 11 p.m. — collecting and processing samples from Simpson Lagoon. Her work focuses on Arctic environmental changes, particularly the effects of permafrost thaw on mercury levels in groundwater.

“Even though I am doing foundational science, I can link it directly to communities in that region that are going to be impacted by the changes that we are seeing,” she says. “As the mercury escapes from the permafrost, it has the potential to impact not just Arctic communities but also anyone who eats fish in the entire world.”

Weathering a storm of setbacks

Growing up in rural Vermont, Bullock spent a lot of time outside, and she attributes her strong interest in environmental studies to her love of nature as a child. Despite her conviction about a career path involving the environment, her path to the Institute has not been easy. In fact, Bullock weathered several challenges and setbacks on the road to MIT.

As an undergraduate at Haverford College, Bullock quickly recognized that she did not have the same advantages as other students. She realized that her biggest challenge in pursuing an academic career was her socioeconomic background. She says, “In Vermont, the cost of living is a bit lower than a lot of other areas. So, I didn’t quite realize until I got to undergrad that I was not as middle-class as I thought.” Bullock had learned financial prudence from her parents, which informed many of the decisions she made as a student. She says, “I didn’t have a phone in undergrad because it was a choice between getting a good laptop that I could do research on or a phone. And so I went with the laptop.”

Bullock majored in chemistry because Haverford did not offer an environmental science major. To gain experience in environmental research, she joined the lab of Helen White, focusing on the use of silicone bands as passive samplers of volatile organic compounds in honeybee hives. A pivotal moment occurred when Bullock identified errors in a collaborative project. She says, “[Dr. White and I] brought the information about flawed statistical tests to the collaborators, who were all men. They were not happy with that. They made comments that they did not like being told how to do chemistry by women.”

White sat Bullock down and explained the pervasiveness of sexism in this field. “She said, ‘You have to remember that it is not you. You are a good scientist. You are capable,’” Bullock recalls. That experience strengthened her resolve to become an environmental scientist. “The way that Dr. Helen White approached dealing with this problem made me want to stick in the STEM field, and in the environmental and geochemistry fields specifically. It made me realize that we need more women in these fields,” she says.

As she reached the end of college, Bullock knew that she wanted to continue her educational journey in environmental science. “Environmental science impacts the world around us in such visible ways, especially now with climate change,” she says. She submitted applications to many graduate programs, including to MIT, which was White’s alma mater, but was rejected by all of them.

Undeterred, Bullock decided to get more research experience. She took a position as a lab technician at the Max Planck Institute of Marine Microbiology in Bremen, Germany, where she studied methane emissions from seagrass beds — her first foray into chemical oceanography. A year later, she applied to graduate schools again and was accepted by nearly all of the programs, including MIT. She hopes her experience can serve as a lesson for future applicants. “Just because you get rejected the first time does not mean that you’re not a good candidate. It just means that you may not have the right experience or that you didn’t understand the application process correctly,” she says.

Understanding the ocean through the lens of chemistry

Ultimately, Bullock chose MIT because she was most interested in the specific scientific projects within the program and liked the sense of community. “It is a very unique program because we have the opportunity to take classes at MIT and access to the resources that MIT has, but we also perform research at Woods Hole,” she says. Some people warned her about the cutthroat nature of the Institute, but Bullock has found the exact opposite to be a true. “A lot of people think of MIT, and they think it is one of those top tier schools, so it must be competitive. My experience in this program is that it is very collaborative because our research is so individual and unique that you really can’t be competitive. What you are doing is so different from any other student,” she says.

Bullock joined the group of Matthew Charette, senior scientist and director of the WHOI Sea Grant Program , which investigates the ocean through a chemical lens by characterizing the Arctic groundwater sampled during field campaigns in Prudhoe Bay, Alaska. Bullock analyzes mercury and biotoxic methylmercury levels impacted by permafrost thaw, which is already affecting the health of Arctic communities. For comparison, Bullock points to mercury-based dental fillings, which have been the subject of scientific scrutiny for health impacts. She says, “You get more mercury by eating sushi and tuna and salmon than you would by having a mercury-based dental filling.”

Promoting environmental advocacy

Bullock has been recognized as an Arctic PASSION Ambassador for her work in the historically underresearched Arctic region. As part of this program, she was invited to participate in a “sharing circle,” which connected early-career scientists with Indigenous community members, and then empowered them to pass what they learned about the importance of Arctic research onto their communities. This experience has been the highlight of her PhD journey so far. She says, “It was small enough, and the people there were invested enough in the issues that we got to have very interesting, dynamic conversations, which doesn’t always happen at typical conferences.”

Bullock has also spearheaded her own form of environmental activism via a project called en-justice , which she launched in September 2023. Through a website and a traveling art exhibit, the project showcases portraits and interviews of lesser-known environmental advocates that “have arguably done more for the environment but are not as famous” as household names like Greta Thunberg and Leonardo DiCaprio.

“They are doing things like going to town halls, arguing with politicians, getting petitions signed … the very nitty-gritty type work. I wanted to create a platform that highlighted some of these people from around the country but also inspired people in their own communities to try and make a change,” she says. Bullock has also written an op-ed for the WHOI magazine, Oceanus , and has served as a staff writer for the MIT-WHOI Joint Program newsletter, “ Through the Porthole .”

After she graduates this year, Bullock plans to continue her focus on the Arctic. She says, “I find Arctic research very interesting, and there are so many unanswered research questions.” She also aspires to foster further interactions like the sharing circle.

“Trying to find a way where I can help facilitate Arctic communities and researchers in terms of finding each other and finding common interests would be a dream role. But I don’t know if that job exists,” Bullock says. Given her track record of overcoming obstacles, odds are, she will turn these aspirations into reality.

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How to train your mind for a better cognition.

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How do I train my mind for a better cognition? originally appeared on Quora : the place to gain and share knowledge, empowering people to learn from others and better understand the world.

Answer by Dr. Abbie Maroño, PhD in Psychology and Behavior Analysis, on Quora :

Training your mind for better cognition involves integrating various evidence-based strategies into your daily routine. There are too many to cover them all in one response, so based on the empirical literature here are my top suggestions.

Cognitive Behavioral Therapy (CBT)

Cognitive Behavioral Therapy (CBT) is a widely used therapeutic approach that focuses on identifying and changing negative thought patterns and behaviors. It is grounded in the understanding that our thoughts, feelings, and behaviors are interconnected, and by modifying one aspect, we can influence the others. For effective implementation, this approach would require you to work with a qualified therapist within a controlled environment, because attempting CBT without proper guidance can risk reinforcing harmful habits.

For non-therapeutic approaches that you can implement at home, mindfulness is my top suggestion.

Mindfulness

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Mindfulness meditation involves paying attention to the present moment without judgment, which can significantly improve cognitive function. Research suggests that regular mindfulness practice enhances attention, working memory, and cognitive flexibility. It requires dedication to establish a consistent practice, but the benefits can be profound for overall well-being and cognitive performance.

Get Sufficient Sleep

Quality sleep is also essential for cognitive function and overall well-being. Adequate sleep facilitates memory consolidation, information processing, and problem-solving abilities, ensuring a sharp and alert mind during waking hours. Establishing a regular sleep schedule and creating a conducive sleep environment can help improve sleep quality. Prioritize getting 6-9 hours of uninterrupted sleep per night to support optimal cognitive function.

Stay Physically Active

Regular exercise is not only beneficial for physical health but also for cognitive function. Aerobic exercise has been shown to increase blood flow to the brain, promote the growth of new neurons, and enhance cognitive abilities such as attention and memory. Incorporate activities you enjoy, such as walking, swimming, or cycling, into your routine to support brain health.

Stress Management

Finally, managing stress is crucial for maintaining cognitive function. I personally think that this is the hardest point to address because stress tends to be a pervasive part of our modern lifestyles. However, chronic stress can impair memory, attention, and decision-making skills, hindering cognitive performance. Implementing stress management techniques such as deep breathing exercises, progressive muscle relaxation, and mindfulness practices helps reduce stress levels and promote cognitive resilience. By effectively managing stress, individuals can clear the path to cognitive excellence and maximize their mental potential.

In summary, training your mind for better cognition doesn’t happen overnight, even with sufficient sleep, it requires consistent changes to daily habits and routines.

This question originally appeared on Quora - the place to gain and share knowledge, empowering people to learn from others and better understand the world.

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Kohberger's alibi disputes his location on night of Idaho student killings: Lawyers

The PhD grad student was arrested on Dec. 30, 2022, at his family's home.

Lawyers for Bryan Kohberger -- the man accused of stabbing to death four Idaho college students in November 2022 -- plan to use analysis of cellphone tower data to show he was not at the home where the killings occurred at the time police believe the crime happened, according to a new court filing.

Kohberger, a one-time Ph.D. student charged in the murders, plans to challenge the prosecutor's case with expert analysis of cellphone tower data, his lawyers said in a court filing made public Wednesday.

His lawyers argue their analysis shows Kohberger was not only not at the King Road home where four students were found stabbed to death in Nov. 2022 but that he was driving elsewhere.

"Mr. Kohberger was out driving in the early morning hours of Nov. 13, 2022, as he often did to hike and run and/or see the moon and stars. He drove throughout the area south of Pullman, Washington, west of Moscow, Idaho," Kohberger's lead attorney, Anne Taylor, said in the filing.

PHOTO: In this Sept. 13, 2023, file photo, Bryan Kohberger, accused of murder, arrives for a hearing in the courtroom in Latah County District Court, in Moscow, Idaho.

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Prosecutors have alleged that in the early hours of Nov. 13, 2022, Kohberger broke into an off-campus home and stabbed four University of Idaho students to death: Ethan Chapin, 20; Madison Mogen, 21; Xana Kernodle, 20, and Kaylee Goncalves, 21.

Kohberger, who at the time was a criminology Ph.D. student at nearby Washington State University, was indicted in May 2023 and charged with four counts of first-degree murder and one count of burglary. At his arraignment, he declined to offer a plea, so the judge entered a not-guilty plea on his behalf.

Kohberger could face the death penalty if convicted.

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After Kohberger moved to the area in June 2022, his lawyer said, his "avid" habit as a runner and hiker prompted him to explore his new surroundings -- but as the school year got busy, those hikes increasingly became "nighttime drives." Taylor added that the alibi is "supported by data from Mr. Kohberger's phone showing him in the countryside late at night and/or in the early morning on several occasions," including "numerous" pictures from "several different late evenings and early mornings, including in November, depicting the night sky."

That drive included Wawawai Park, a remote area along Snake River -- about 20 miles away from Kohberger's apartment at the time and roughly 28 miles away from the off-campus home where the killings occurred.

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To back up the defense's alibi claim, Kohberger's legal team told the court they intend to offer the testimony of their own expert "to show that Bryan Kohberger's mobile device was south of Pullman, Washington and west of Moscow, Idaho on November 13, 2022; that Bryan Kohberger's mobile device did not travel east on the Moscow-Pullman Highway in the early morning hours of November 13th," and thus his "could not" be the car captured on video traveling along the Moscow-Pullman highway near a local cannabis shop.

Further details "as to Mr. Kohberger's whereabouts as the early morning hours progressed," including analysis from their expert, "will be provided once the State provides discovery requested," Taylor wrote in the newly-released court document. "If not disclosed, [Sy Ray, their expert]'s testimony will also reveal that critical exculpatory evidence, further corroborating Mr. Kohberger's alibi, was either not preserved or has been withheld."

Wednesday's filing aligns with previous comments from the defense about Kohberger's whereabouts the night of the murder -- that he was driving around alone that night, which, they have claimed, had long been a habit of his.

After a six-week hunt, police zeroed in on Kohberger as the suspect in the murders of the students, arresting him in December 2022 at his family's home in Pennsylvania. Investigators have said they relied in part on records from cellphone towers and on surveillance video of a car seen in the area of the King Road house on the night of the killings -- part of which, they have said, includes a two-hour timespan in those after midnight hours where Kohberger's phone "stops reporting to the network, which is consistent with either the phone being in an area without cellular coverage, the connection to the network is disabled (such as putting the phone in airplane mode), or that the phone is turned off."

A trial date has yet to be set.

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how to read phd

PhD for ‘professor’ Bumrah: Ian Bishop heaps praise on MI pacer after PBKS heroics

Ipl 2024: former west indies cricketer ian bishop hailed a new role for mi's jasprit bumrah in his praise for the pacer's heroic spell against pbks on april 18. bishop wants bumrah to hold fast-bowling lectures for young and aspiring cricketers across india..

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how to read phd

  • Ian Bishop said he would give a fast-bowling PHD to Jasprit Bumrah after PBKS vs MI
  • Bumrah received the POTM for his performance in MI's win over PBKS
  • MI clinched a thrilling victory over PBKS by 9 runs on April 18

Former West Indies cricketer Ian Bishop said he would give a fast-bowling PHD to Jaspirt Bumrah, after his sensational spell in MI's thrilling victory over PBKS in the Indian Premier League (IPL) 2024, on April 18 in Mullanpur. In the midst of a lacklustre overall bowling performance from MI's bowling unit, Bumrah's 3/21 spell became crucial in his side securing a nail-biting victory on Thursday by 9 runs. Bishop believes that Bumrah has the knowledge and expertise of the game, suitable enough to host fast-bowling lectures for young and aspiring cricketers across India even before his retirement from cricket.

Paltan, kaisa hai heart rate ab? 😅 #MumbaiMeriJaan #MumbaiIndians #PBKSvMI pic.twitter.com/SmfIjKR898 — Mumbai Indians (@mipaltan) April 18, 2024
If I could anoint Jasprit Bumrah with a fast bowling PHD, I would. He is a terrific communicator, Knowledgable & articulate. I’d then have him hold bowling lectures to young for aspiring seam bowlers across the country at all levels. I wouldn’t wait until he retired. #professor . — Ian Raphael Bishop (@irbishi) April 18, 2024
Speechless ðŸä·â€â™‚️🙇‍♂️ #MumbaiMeriJaan #MumbaiIndians #PBKSvMI pic.twitter.com/k9OiSzYF8b — Mumbai Indians (@mipaltan) April 18, 2024

HOW BUMRAH CHANGED THE GAME

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IN THIS STORY

IMAGES

  1. PHD READING TIPS!: How to read a research paper. Every PhD Student

    how to read phd

  2. How to Write PhD Thesis Very Smartly in 1 month

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  3. How to read a research paper

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  4. The How to PhD book is LIVE on Amazon!

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  5. How to get a PhD: Steps and Requirements Explained

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  6. How to write phd progress report and present it (with sample video

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  1. Is PhD End

  2. How To Read Papers Fast & Effectively- PhD student| How to read a Research Paper ?|Research Papers

  3. Narrative Writing

  4. Mikio Braun & Ingmar (Machines and Molecules E01)

  5. Reading research papers for your literature review #shorts #shortsfeed

  6. How to learn from a book (maybe)

COMMENTS

  1. How to read scientific papers quickly (and effectively organize them

    Maybe it will lead to a breakthrough in your own work or help explain a surprise result! 5. Summarize your thoughts and critiques. Re-read your notes so far to check for any missed questions. Go back and extract sentences or paragraphs of the paper that you want to challenge so you can quickly find them verbatim.

  2. How to Read Like a Graduate Student

    Pay attention to text format. Take a glance at bold and italicized text because these are almost certainly going to appear on the exam or discussed during class. Pay attention to things that stand out, and write those down. Highlight or take notes. Never read anything without a highlighter and pencil nearby.

  3. How to Read Research Papers: A Cheat Sheet for Graduate Students

    Move onto the thirst pass. The third pass (Maximum: four hours) You should go to the third stage (the third pass) for a complete understanding of the paper. It may take you a few hours this time to read the paper. However, you may want to avoid reading a single paper for longer than four hours, even at the third pass.

  4. How to Read Like a Doctoral Student

    But, when you read like a doctoral student, reading is your job. You must treat it as such. Keeping that in mind, every time I crack open a book or journal article, I do so with a clear purpose in mind. I read to accomplish a predefined goal. When done, I don't linger in the material, I move on.

  5. How to find, read and organize papers

    Maya Gosztyla is a PhD student in biomedical sciences at the University of California, San Diego. ... Step 3: read. This is the tricky part — you have to actually read the papers. The key is to ...

  6. PDF Reading Strategies for Graduate Students

    Reading Strategies for Graduate Students. Each genre and type of writing has its unique conventions. Learn the rhetorical conventions of texts and the macrostructure of texts in your field so you can strategically read them. In other words, we can learn and predict where key information will be in a text.

  7. 6 Essential Study Tips for the PhD Student

    PhD study tip #1: Write early and write often. Obviously the more papers you write the better - but that's not what I mean. I mean write as often as possible, even if you don't have a paper on the horizon. Start writing as early as possible in your PhD, and write regularly. Some people write daily, others once a week.

  8. Reading, Note-taking, & Studying Advice

    Aimed more towards for-fun reading, but has some good advice Again towards for-fun reading, but has tons of additional links and good advice. How to improve reading comprehension advice; Reading a textbook quickly and effectively; There are a bunch of videos in the next tabs that discuss a variety of different types of reading strategies - how to read faster, how to read a textbook, how to ...

  9. How to Read Like a PhD Student

    Read thoroughly, take your time, take notes, and consider which themes and subjects pique your interest. Chapters- Read the first 4-5 pages of a chapter. This is where the topic and argument of the chapter are presented. Then read first three sentences of each paragraph and skim the rest.

  10. How to Read for Your PhD

    This video offers tips on how to optimize reading academic sources for your PhD. The presenter is Dr. Evelyn Reynolds, Director of Leader Studies, the schola...

  11. 3 Reading Strategies for Doctoral Students

    3. Speed Reading. As a busy doctoral student, you do not have much time to spend reading articles, books and journals. You have your own research to conduct, as well as a personal life to maintain. That is why many doctoral students study the art of speed-reading. Effective speed-reading requires awareness of how you read text.

  12. How to Read a Journal Article

    1. Read the title, abstract and the aims/objectives, usually found at the end of the introduction. 2. Read through the headings used throughout the paper (but not the content under them at this stage) 3. Read the conclusions.

  13. How to read and take notes like a PhD

    In this video I share with you how I read and take notes. I did this through my PhD and my postdoctoral studies. I have tried nearly every other reading and ...

  14. Am I reading enough of the scientific literature? Should I read for

    As a PhD student, you are required to read in depth the papers that directly pertain to your particular subfield. A PhD is the process of becoming an expert in your discipline, and you cannot do that without mastering the minute details of it, which you will only learn by reading in depth the papers published (and attending conferences, asking ...

  15. 5 must-reads for doctoral students

    Reading some expert guide books will expand your knowledge and pave the way for the rigorous work ahead. Capella University faculty, doctoral students, and alumni recommend these five books for doctoral students in any discipline. 1. How to Read a Book: The Classic Guide to Intelligent Reading by Mortimer J. Adler.

  16. The way I take notes for my PhD

    Add some writing to my scrivener file. This part has helped me to actually start writing. Since the beginning of my PhD I have always added sentences to my Scrivener file to match the article I am reading. For example: This is my scrivener file for my whole PhD. On the left side you can see I have folders set up and each of these contains sub ...

  17. PDF Reading for a PhD

    According to national legislation, a PhD takes 3600 notional hours. These hours are notional, some will need more and some will need less than this, depending in large part on how familiar you were with the relevant literature before you started, but this is a useful average to work from. For a 4 year PhD, this works out to 900 hours a year and ...

  18. 9 Note-Taking Tips For PhD Research

    For a PhD student, active reading and note-taking is a necessity because you are expected to contribute to the body of knowledge in your field of study. 3. Include full references in your notes. The notes for each material read should start with the reference in the reference style recommended by your school or department.

  19. How to map read

    To understand what a paper is about, you have to not only read it in detail but also understand it, and how it relates to the other papers it mentions and however many since. ... sea of authors' to listing those authors' work that justifies what YOU want to say is probably an early lesson any PhD student has to learn. It's worth the ...

  20. Recommended Reading

    She earned a PhD in the biosciences and has worked as a hiring manager in industry for over a decade. Rebecca Peabody, The Unruly PhD: Doubts, Detours, Departures, and Other Success Stories (2014) A collection of first-hand accounts and interviews with people who've travelled in, through, and beyond graduate school. Read my review here.

  21. The Ultimate Guide for Ph.D. Students to Conduct Research ...

    A research plan outlines the steps you need to take to conduct your research effectively. It includes the research question, research objectives, research design, data collection methods, data ...

  22. How to Read and Take Notes Effectively

    🧠 Keep exploring at https: https://try.lingoda.com/Charlotte_Trial Discount code: CHARLOTTE22#lingoda202210Hi 👋 today I want to give you some tips and tric...

  23. Note-Taking Techniques

    Reading techniques for undergraduate students, a primer: Learn how to write arguments first, then how to read in depth, then how to skim - Raul Pacheco-Vega, PhD linked to this post on May 1, 2020 […] in an Excel dump and a whole lot of reading strategies, literature review writing processes and note-taking techniques.

  24. Students & Graduates

    Ignite your career journey with an unforgettable experience at Airbus! We believe that learning happens with hands-on experience, and guidance from the industry's best. That's why we have built a series of programmes for students leaving school, taking time out to gain some industry experience, or graduating from university! Join us.

  25. Researching extreme environments

    During a near-shore Beaufort Sea sampling campaign in July 2023, PhD student Emma Bullock sampled ocean water with recent meltwater inputs to test for radium isotopes, trace metals, carbon, nutrients, and mercury. A quick scan of Emma Bullock's CV reads like those of many other MIT graduate students: She has served as a teaching assistant ...

  26. St. Jude takes the lead on prevention and treatment of COVID-19 in

    "Representatives of St. Jude infectious diseases and clinical pharmacy helped develop these guidelines, especially regarding this uniquely vulnerable population," said co-corresponding author Josh Wolf, MBBS, PhD, of the St. Jude Department of Infectious Diseases. "These new national guidelines for prevention and treatment of COVID-19 in ...

  27. How To Train Your Mind For A Better Cognition

    Establishing a regular sleep schedule and creating a conducive sleep environment can help improve sleep quality. Prioritize getting 6-9 hours of uninterrupted sleep per night to support optimal ...

  28. Kohberger's alibi disputes his location on night of Idaho student

    The PhD grad student was arrested on Dec. 30, 2022, at his family's home. Lawyers for Bryan Kohberger -- the man accused of stabbing to death four Idaho college students in November 2022 -- plan ...

  29. Where to watch Vanderbilt vs. Florida baseball today: TV channel, live

    Florida (19-17) has won two in a row on the heels of a six-game losing streak, but the Gators nonetheless find themselves unranked, having dropped out of this week's polls.

  30. IPL 2024: Ian Bishop hails Jasprit Bumrah for PHD after MI pacer's PBKS

    In Short. Former West Indies cricketer Ian Bishop said he would give a fast-bowling PHD to Jaspirt Bumrah, after his sensational spell in MI's thrilling victory over PBKS in the Indian Premier League (IPL) 2024, on April 18 in Mullanpur. In the midst of a lacklustre overall bowling performance from MI's bowling unit, Bumrah's 3/21 spell became ...